Species	Tissue	CellType	Marker	Resource
Mouse	Skin of body	Activated CD8-positive, alpha-beta T cell	Cd28, Cd69	34642245
Mouse	Skin of body	B cell	Cd19, Cd79a, Cd79b, Cd74, Cd83, Cxcl16, H2-Aa, H2-Eb1, Ifitm1, Ms4a1, Ptprc	32531238, 35621713, 32433953, 35789215, 35958578, 30737373, 34642245
Mouse	Skin of body	Basal cell	Krt14, Krt5, Mt2, Mki67, Calm4, Cenpa, Col17a1, Fcgbp, Fos, Fosl1, Gata3, Grhl1, Ifngr1, Il1r2, Il33, Il6ra, Klf5, Krt1, Krt10, Krt77, Krtdap, Ly6a, Mt4, Ndufa4l2, Pou3f1, Ptgs2, Serpinb2, Socs3, Tfap2c, Ube2c	35910794, 32187560, 32094197, 35476447
Mouse	Skin of body	Basophil	Hdc	35789215
Mouse	Skin of body	Blood vessel endothelial cell	Cdh5, Pecam1, Flt1, Kdr	35789215, 34922949
Mouse	Skin of body	Cancer-associated fibroblast	Cd34, Dpp4, Ly6a, Ly6c1	34354077
Mouse	Skin of body	Cardiac muscle cell	Acta2, Myh11, Mylk, Tpm2	35108061
Mouse	Skin of body	CD4-positive, alpha-beta T cell	Cd4, Cd3e, Gzmb	35621713, 34642245
Mouse	Skin of body	CD8-positive, alpha-beta T cell	Cd8a, Gzmk, Cd3e, Clec4e, Gzmb, Pdcd1	35621713, 34642245
Mouse	Skin of body	Chondrocyte	Col2a1, Cytl1, Sox9	35789215, 35755815
Mouse	Skin of body	Classical monocyte	Chil3, Ctsc, Fcgr1, Lgr5, Ly6c2	35789215
Mouse	Skin of body	Dendritic cell	Cd74, Cd209a, H2-Eb1, Itgam, Lyz2, Adgre1, Ccl22, Ccl9, Ccr7, Cd207, Cd80, Cd86, Clec9a, Csf1r, Cst3, Ctss, Fscn1, H2-DMb2, Itgax, Jak2, Ptprc, Sirpa, Wdfy4, Xcr1, Zbtb46	32531238, 35621713, 32433953, 32187560, 35789215, 35958578, 35300986, 35785521, 35916125, 30737373, 35108061, 30721153, 34642245
Mouse	Skin of body	Dendritic epidermal T cell	Cd3e, Cd3g, Thy1, Trdc, Trgc1	33205009
Mouse	Skin of body	Dental papilla cell	Fgf7, Rspo3, Sostdc1	32315612
Mouse	Skin of body	Differentiated keratinocyte	Krt10, Krt2, Dcn, Krt1	29964033
Mouse	Skin of body	Double negative thymocyte	Cd3e, Cd3g, Klrd1, Nkg7	35789215, 34642245
Mouse	Skin of body	Effector memory CD8-positive, alpha-beta T cell	Cd44, Cd69	34642245
Mouse	Skin of body	Endothelial cell	Pecam1, Cdh5, Cldn5, Cav1, Cd34, Cd93, Fabp4, Ly6c1, Cald1, Egfl7, Gpihbp1, Ly6e, Mgp, Plvap, Ptprc, Sele, Selp, Tek	34769061, 33205009, 35671621, 32433953, 29964033, 35910794, 32187560, 35577040, 34936223, 35300986, 35785521, 35916125, 30737373, 35077667, 35108061, 35664010
Mouse	Skin of body	Endothelial cell of lymphatic vessel	Lyve1, Prox1, Ackr4, Anxa2, Ccl21a, Flt4, Il33, Itga2b, Kdr, Madcam1, Marco, Mrc1, Pdpn	32433953, 35789215, 32251437, 30737373
Mouse	Skin of body	Endothelial cell of vascular tree	Lyve1, Pecam1	35910794, 32990218
Mouse	Skin of body	Epithelial cell	Anpep, Cd1d1, Cd44, Cdh1, Epcam, Ifngr1, Itga2, Tlr2	30737144, 35077667, Company
Mouse	Skin of body	Epithelial fate stem cell	Itgb1, Tcp1	16408300
Mouse	Skin of body	Erythrocyte	Hba-a2, Hbb-bt, Alas2, Gypa, Hba-a1, Hbb-bs, Tspo2	34922949, 30737373
Mouse	Skin of body	Exhausted T cell	Gzmb, Havcr2, Lag3, Pdcd1, Prf1, Tigit	35958578, 34642245
Mouse	Skin of body	Fat cell	Apoe, Lpl	34922949, 35755815
Mouse	Skin of body	Fibroblast	Col1a1, Dcn, Lum, Col3a1, Pdgfra, Twist2, Coch, Col1a2, Col6a1, Dpp4, Fbln2, Gpx3, Pdpn, Plac8, Sparc, Wif1, Acta2, Anxa3, Apod, Cd34, Col12a1, Col5a1, Col6a2, Col6a3, Crabp1, Cxcl5, Cygb, Des, Dkk1, En1, Fn1, Il6, Lef1, Mest, Mfap4, Mmp2, Notch3, Ogn, Pecam1, Ptprc, Rgs5, Serpinf1, Slit2, Thy1	34769061, 33205009, 35671621, 32433953, 35910794, 32187560, 35789215, 35577040, 32990218, 35796321, 34936223, 35300986, 34922949, 35785521, 35916125, 30737373, 35108061, 35664010, 35755815, 25883361
Mouse	Skin of body	Fibroblastic reticular cell	Dlk1	32990218
Mouse	Skin of body	Follicle stem cell	Lgr5, Cd34, Postn, Calml3, Crip1, Dkk3, Lrig1, Ptn, Sox9, Tmsb10, Wfdc3	30283141, 32187560, 34625556, 35476447
Mouse	Skin of body	Gamma-delta T cell	Trdc, Cd163l1, Cd3d, Cd3e, Cd3g, Cd44, Cd69, Ctla2a, Cxcr6, Thy1, Trdv4, Trgc1, Trgc2, Trgc4	33205009, 35785521, 35108061, 20381152
Mouse	Skin of body	Goblet cell	Flg, Krt1, Krt10	35910794
Mouse	Skin of body	Hair follicle cell	Krt17, Krt79, Sostdc1, Defb6, Fst, Postn, Akr1c18, Aqp3, Cd34, Krt14, Krt15, Krt5, Lhx2, Sox9	29964033, 32187560, 35577040, 35785521, 35476447
Mouse	Skin of body	Hair follicle dermal papilla cell	Alpl, Corin, Crabp1, Inhba, Rasd1	32990218, 35108061
Mouse	Skin of body	Hair follicle inner bulge cell	Fgf18, Lgr5, Lgr6, Postn, Ptn	30283141, 35785521
Mouse	Skin of body	Hair follicle outer bulge cell	Dsp, Lgr5, Lhx2	35789215
Mouse	Skin of body	Hair follicle suprabasal bulge cell	Alox12e, Cst6, Defb6, Krt79, Sprr1a	32094197
Mouse	Skin of body	Hair follicular stem cell	Angptl7, Cd34, Dkk3, Grem1, Id2, Krt24, Pdzrn4, Postn, S100a4, Sfrp1, Thsd1, Tnc	32094197
Mouse	Skin of body	Helper T cell	Cd4, Cxcl5	35789215
Mouse	Skin of body	Hematopoietic stem cell	Cd34	30737373
Mouse	Skin of body	Interfollicular epidermis basal cell	Bhlhe40, Cxcl14, Ifitm3, Krt14, Krt15, Krt5, Mt2	35785521, 35476447
Mouse	Skin of body	Keratinocyte	Krt14, Krt5, Krt15, Dsp, Krt1, Krt10, Apoe, Birc5, Cdh1, Cdh15, Cdh3, Col17a1, Il33, Krt17, Krt2, Krt79, Krtdap, Lhx2, Mki67, Sox9, Thbs1, Ube2c	34769061, 33205009, 35671621, 29964033, 31568772, 35789215, 35577040, 32990218, 34936223, 35300986, 34922949, 35916125, 35108061, 32315612
Mouse	Skin of body	Keratinocyte stem cell	Cd34, Itga6	23483385
Mouse	Skin of body	Langerhans cell	Cd207, Cd74, Cd86, Ctss, H2-Eb1, Cacnb3, Cd24a, Csf1r, Epcam, H2-Ab1, H2-M2, Ltc4s, Siglec1	33205009, 35671621, 29964033, 35210411, 32187560, 35958578, 35300986, 35785521, 30721153
Mouse	Skin of body	Macrophage	Adgre1, Fcgr1, Itgam, Lyz2, C1qc, Cd68, Mrc1, Ms4a7, Apoe, Arg1, Cd14, Cd163, Cd72, Cd86, Chil3, Cpe, Cryab, Csf1r, Ctsc, Cxcl10, Cxcl14, Ear2, Folr2, H2, H2-Eb1, Itgax, Ly6c2, Mafb, Plac8, Ptprc, Rsad2, Sparc, Timp2, Trem2	32531238, 33205009, 35621713, 32433953, 33653716, 35210411, 32187560, 31568772, 35789215, 35958578, 35300986, 34922949, 35785521, 35916125, 35108061, 30721153, 35664010, 34642245
Mouse	Skin of body	Mast cell	Tpsb2, Cma1, Fcer1a, Kit, Cpa3, Tpsab1, Alox15, Gata2, Hdc, Mcpt4, Mcpt8, Ms4a2	33205009, 35621713, 35671621, 31568772, 35789215, 35958578, 35300986, 35108061
Mouse	Skin of body	Mature conventional dendritic cell	Cacnb3, Ccr7, Cd274, Cd40, Fscn1, Tmem123	33205009
Mouse	Skin of body	Mature NK T cell	Cd3g, Cd8a, Nkg7	30737144, 35108061
Mouse	Skin of body	Melanocyte	Dct, Pmel, Sox10, Mlana, Oca2, Pax3, Plp1	35671621, 35577040, 32990218, 35300986, 34922949
Mouse	Skin of body	Memory T cell	Cd4, Cd44, Foxp3, Icos, Il7r	30737144, 35958578, 34642245
Mouse	Skin of body	Migratory DC	Ccr7, Flt3, Itgax	34820606
Mouse	Skin of body	Monocyte	Adgre1, Cd14, Lyz2, Ace, Cd68, Csf1r, Cx3cr1, Fcgr1, Gsr, Hp, Itgam, Itgax, Ly6c1, Ly6c2, Lyl1, Mgst1, Plac8, Ptprc	32531238, 33205009, 35621713, 35671621, 32433953, 35210411, 31568772, 35958578, 35108061, 30721153, 34642245
Mouse	Skin of body	MregDC	Ccr7, Cd274, Flt3, Itgax	34820606
Mouse	Skin of body	Myeloid suppressor cell	Gsr, Itgam, Ly6g	33653716
Mouse	Skin of body	Myoblast	Cdh15, Pax7	35789215
Mouse	Skin of body	Myofibroblast cell	Acta2, Myl9, Aoc3, Cald1, Dpp4, Tagln	32187560, 30737373, 32302523, 35108061
Mouse	Skin of body	Naive T cell	Ccr7, Lef1, Sell, Tcf7	34642245
Mouse	Skin of body	Natural killer cell	Ncr1, Gzma, Nkg7, Klrb1c, Eomes, Fcer1g, Gzmb, Il2rb, Klra7, Klra8, Klrb1, Klrd1, Klre1, Prf1	32531238, 33205009, 35621713, 32433953, 35789215, 35958578, 35108061, 30721153, 34642245
Mouse	Skin of body	Neutrophil	S100a8, S100a9, Cd14, Csf3r, Ly6g, Arg1, Ccl2, Cebpd, Clec4d, Cxcl10, Fcer1g, Fcgr3, Hdc, Ly6a, Sirpb1c, Slc11a1, Smox, Spi1	32531238, 33205009, 35621713, 35210411, 35789215, 35300986, 35916125, 30721153, 34642245
Mouse	Skin of body	Osteoblast	Col1a1, Col5a1	35755815
Mouse	Skin of body	Pericyte	Rgs5, Rgs4, Acta2, Kcnj8	35671621, 35910794, 35789215, 32990218, 35300986, 34922949, 35664010
Mouse	Skin of body	Plasmacytoid dendritic cell	Cd300c, Klk1, Siglech	32433953, 30721153, 34642245
Mouse	Skin of body	Preadipocyte	Atxn1, Cd34, Dpp4, Ly6a	32302523
Mouse	Skin of body	Prickle cell	Krt1, Krt10, Mt4	35910794, 32187560, 35476447
Mouse	Skin of body	Progenitor cell	Acan, Acta2, Cd200, Cdk1, Enpp2, Lrrc15, Top2a	32990218, 35108061, 32315612
Mouse	Skin of body	Regulatory T cell	Foxp3, Cd4, Cd3e, Odc1	35621713, 30737144, 33653716, 35789215, 35958578, 34642245
Mouse	Skin of body	Schwann cell	Plp1, Mpz, Gpm6b, Kcna1, Cadm4, Cdh19, Dbi, Gap43, Itih5, Mbp, S100b, Sox10	35910794, 35789215, 32990218, 35796321, 34936223, 35300986, 34922949, 30737373
Mouse	Skin of body	Sebaceous gland cell	Mgst1, Pparg, Scd1, Akr1c18, Cers4, Cidea, Igfbp2, Krt25, Pdk4, Prdm1, Soat1, Zfp655	29964033, 32187560, 35577040, 32094197, 35785521, 35476447
Mouse	Skin of body	Sebum secreting cell	Pparg, Scd1, Scd2	34769061
Mouse	Skin of body	Sheath cell	Cd200, Ednrb, Stmn2	32315612
Mouse	Skin of body	Smooth muscle cell	Acta2	34769061
Mouse	Skin of body	Squamous cell of epidermis	Krt1, Krt77, Mt4	35785521
Mouse	Skin of body	T cell	Cd3d, Cd3e, Cd3g, Cd4, Cd8a, Nkg7, Thy1, Cd81, Cd8b1, Cdh15, Ctla4, Cxcr6, Foxp3, Gzmb, Icos, Ifng, Lat, Maf, Mki67, Pdcd1, Ptprc, Trbc1, Trbc2	35671621, 32433953, 29964033, 32187560, 35789215, 35577040, 35958578, 35300986, 30737373, 30721153, 34642245
Mouse	Skin of body	Tissue-resident macrophage	Adgre1, Cd163, Ctsc	35789215
Mouse	Skin of body	Type 1 conventional dendritic cell	Clec9a, Batf3, H2-Ab1, H2-Eb1, Irf8, Itgax, Xcr1	33205009, 32433953
Mouse	Skin of body	Type 2 conventional dendritic cell	Cd209a, Cd209d, H2-Aa, H2-Eb1, Irf4, Itgax, Mgl2, Sirpa	33205009, 32433953
Mouse	Skin of body	Unconventional alpha-beta T cell	Cd3d, Cd4, Cd8a, Foxp3, Trac, Trbc1, Trbc2	33205009